PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000183754
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 396aa    MW: 44326.7 Da    PI: 8.5579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000183754genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.79.2e-2317625452127
            NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyr 127
                    ++++++w+fF++r +++a+g r++r t+ gyWka+g+  +v+s+    ++ +g k+t+ fy grap+g+kt+W+m+ey+
  MDP0000183754 176 HGDSEQWFFFIPRPESEARGGRPRRLTTIGYWKASGSPSTVYSSnsnYNRPIGHKRTMGFYIGRAPRGKKTEWMMNEYK 254
                    345669*************************************85544556***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.692124297IPR003441NAC domain
PfamPF023656.8E-10169254IPR003441NAC domain
SuperFamilySSF1019413.14E-23174297IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MSPDYESLYI GIWDQTIWRE KPMTSQDEEV FGGGSPLQFG ENRLKNRWGL RRPPRHPLGD  60
LDGARWRSRR SEILVVAQGA LQLSPPLKAL QDCNSLASNS HSICNSKFPT PASHLTPCIW  120
QFGICTCIGN YGCLLDISGK TQKRDATVQV EDWESKILIS SIMLNEKKEV AGEVSHGDSE  180
QWFFFIPRPE SEARGGRPRR LTTIGYWKAS GSPSTVYSSN SNYNRPIGHK RTMGFYIGRA  240
PRGKKTEWMM NEYKAIEAHA DHNNQLSMAA SSSIPRTSTP SAPTLRQEFS LCRVXRKSKS  300
LXAYDRRHPG IEITRNPXLN IQAAPAQGAN HLNQCSTTSN RNPQNMGXRT NLSSLESSSS  360
GGHASQSSQP EQSGILPMAV DDEAIWDWDE LMDNWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-1418025771144NO APICAL MERISTEM PROTEIN
1ut4_B1e-1418025771144NO APICAL MERISTEM PROTEIN
1ut7_A1e-1418025771144NO APICAL MERISTEM PROTEIN
1ut7_B1e-1418025771144NO APICAL MERISTEM PROTEIN
3swm_A1e-1418025774147NAC domain-containing protein 19
3swm_B1e-1418025774147NAC domain-containing protein 19
3swm_C1e-1418025774147NAC domain-containing protein 19
3swm_D1e-1418025774147NAC domain-containing protein 19
3swp_A1e-1418025774147NAC domain-containing protein 19
3swp_B1e-1418025774147NAC domain-containing protein 19
3swp_C1e-1418025774147NAC domain-containing protein 19
3swp_D1e-1418025774147NAC domain-containing protein 19
4dul_A1e-1418025771144NAC domain-containing protein 19
4dul_B1e-1418025771144NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008392026.11e-157PREDICTED: NAC domain-containing protein 90-like
TrEMBLM5VSR52e-79M5VSR5_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF87134123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.23e-39NAC domain containing protein 61